Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015926309.1_cds_XP_016474368.1_66396
CDS Infomation

[gene=LOC107796145] [db_xref=GeneID:107796145] [protein=probable myosin-binding protein 5] [protein_id=XP_016474368.1] [location=complement(join(41291..41499,41579..42436,42977..43712))] [gbkey=CDS]
Sequence

ATGGCTTCAGGATCTTTCAAGTGTTATGTTGAACAAAACACAGGGAAATTTGCATTCTTC
TTCATATATGCTGTTCTTGAATGGATGATGATCATTCTGCTTTTTATTGAGGGGTTTCTT
GCTTTTTTCTCTAATGAATTCGCCAAGTTCTTCGACCTGAAAGTCCCCTGCTTGCTTTGC
ACGAGGATCGATCACATTCTCGTTCACAGGAATGCCAACTTTTATTACAATGAATCCATT
TGTGAAGTTCACAAGAAGGACATTTCTTCCCTTGCTTATTGTCATGTCCACAAGAAGCTG
TCTGATATTAGGAACATGTGCGACGGCTGCCTTCTGTCATTTGCAACAGAGAAAGATGCT
GATTGCGATAGGTACAAGTCACTAGTTGGTATCTTGCACAAGGATATTGATTGCTTTGTG
GAGGATGATAAGAAAGTACATACAAAATCAGGGAAGAAGGAAGATGAGGTCATCCAAATT
GAGAAGGGCGGAATCGTTAGGTGTTCTTGCTGTGGGGAGCCTCTAAAAACAAAGTCAAAG
TATTCCAGGAATGCATCATCAATGAAGGGAAATCCTTATTCTCAAGCTCCTGCTCCATCT
CCAAGATCTCCCTTGACTACGTGGAGAAATGAGGAAGCGCGCCATTTAGAATTGCCTCAT
ACTCAGTACACAGAGGTTAAGTTCATCTCAGATAATGATTTGGACCTTCCTGATGATGAG
GGTATCCCTAATGGAGGTAGAGAGGATATTAAAGCTGCTACTGTACCACTAATACCAGAT
TCGGAGGAGATAAATGATGATGCCTTGAAAACGCCAAATTTTACAAGAAAGAAATTCTTT
GGTATCCCATTGTCAGACTCGGTTCATGCTAGCCCTAGGTGGTCACACAGGCCTAGAAAA
TTGAGTATGGATATTAAGAGTGAATTAATTTCAGAAACTAATGACGCGAGTGCAGTAAAT
GAATCTGACGATGACATCCTGCATCGCTTGAAGAGGCAAGTTCGTTTGGACCACAAGTCT
CTCATGGCACTTTACATGGAACTTGACGAAGAAAGAAGTGCCGCTGCTGTTGCAGCAAAC
AATGCCATGGCTATGATCACTCGCTTACAAGCAGAGAAAGCCGCAGTCCAAATGGAGGCG
TTGCAGTACCAAAGAATGATGGAAGAGCAGGCGGAATATGATCAAGAGGCGCTGCAGGTC
ATGAAAGACTTGCTTTTGAAGAGAGAAGAAGAGATAAAGGTCTTAGATGCTGAACTTGAG
ACATATAGGGAAAGATACGGACATATCAAGAAAGTAGGTAGTGAGGTCTGTGAAGTTGAT
GCAGATGAAGATTATCAAGAGTGGAATTCTCATTCTTTGTCATCCGTTAGTGAAAGATCA
GCATGTGTCAGTCCTGATCAAAATGAGCGCTCTTTTGAATGCTCTGGTGAATATGGAGGG
GAAAATGTGGGTGAATCACATCTTGATTTTGAGAACGAAAGATCGTATCTCATGGGTTTG
TTGACAAATCTTGAAGAGAAAATTAAAACATCTAAGGATGAAGGATTTCATGTATTAGAA
ACAAACGAGGTTAAGCATGGATCCGAAGGAAAAGGAAATGAAAATAAGGTAACTCTTACA
AGAGAAGTGTCACTAATTAGAGAGAGATTGAGAGCCATTGAAGCAGAGAGCGGCTTCTTA
AAACATGCAGCTATGACATTACAGAGGGATGGTGAAGGAACCAAACTCTTGACTGAGATA
GCTGAACATCTGCGGAGACTTAGGCAATCAATTGATTCCCCATCAAAGGATGCAAATGCA
TGA

Peptide Sequence

PEP ID

XP_016474368.1
PEP Infomation

PREDICTED: probable myosin-binding protein 5 [Nicotiana tabacum]
Sequence

MASGSFKCYVEQNTGKFAFFFIYAVLEWMMIILLFIEGFLAFFSNEFAKFFDLKVPCLLC
TRIDHILVHRNANFYYNESICEVHKKDISSLAYCHVHKKLSDIRNMCDGCLLSFATEKDA
DCDRYKSLVGILHKDIDCFVEDDKKVHTKSGKKEDEVIQIEKGGIVRCSCCGEPLKTKSK
YSRNASSMKGNPYSQAPAPSPRSPLTTWRNEEARHLELPHTQYTEVKFISDNDLDLPDDE
GIPNGGREDIKAATVPLIPDSEEINDDALKTPNFTRKKFFGIPLSDSVHASPRWSHRPRK
LSMDIKSELISETNDASAVNESDDDILHRLKRQVRLDHKSLMALYMELDEERSAAAVAAN
NAMAMITRLQAEKAAVQMEALQYQRMMEEQAEYDQEALQVMKDLLLKREEEIKVLDAELE
TYRERYGHIKKVGSEVCEVDADEDYQEWNSHSLSSVSERSACVSPDQNERSFECSGEYGG
ENVGESHLDFENERSYLMGLLTNLEEKIKTSKDEGFHVLETNEVKHGSEGKGNENKVTLT
REVSLIRERLRAIEAESGFLKHAAMTLQRDGEGTKLLTEIAEHLRRLRQSIDSPSKDANA

Transcript Sequence

Gene sequence data has not been registered.